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Nutrient Deficiencies in Plants

Normal growth and development of a plant depends on the availability of various mineral elements in suitable combination in the soil or any growing media. Some elements, such as nitrogen, phosphorous, potassium, calcium, magnesium and sulfur, are needed in relatively large amounts and are termed major, or  macro, nutrients. Other elements, such as iron, boron, manganese, molybdenum and zinc, are needed in very small amounts and are termed minor or trace nutrients. Regardless of the amount required, all of them are essential to plants for completing the life cycle. 

Since major elements are taken up and used by plants in higher amounts, these nutrients need to be replenished more often than the minor elements. When any of these elements are present in concentrations lower than the minimum levels needed or plants can't take them up in sufficient amounts, plant growth and development is compromised. Most nutrient deficiencies cause internal or external symptoms that may appear on any or all organs of the plant. Plants that grow in soils with nutritional deficiencies, or in soils where nutrient uptake is hindered, may also be more susceptible to infection. For example, brown spot of rice, which is caused by the fungal pathogen Cochliobolus miyabeanus, is much more severe in nutrient-deficient plants.

What causes plants to have nutrient deficiencies?

Nutrient deficiency may occur due to one or more of the following reasons:

  1. The soil or growth medium is deficient in the required nutrient.
  2. The soil is not sufficiently moist to allow the roots to take up and transport the nutrients.
  3. The soil is not deficient in the nutrient, but another factor limits the plant’s nutrient uptake ability. Some nutrients, for example, are more available to the plant at certain pH levels.
  4. The nutrient is unable to reach the organ where it is needed most. (Example: Blossom end rot of  tomato, pepper, and eggplant)
  5. A too-high concentration of one nutrient may outcompete the uptake of a similar nutrient. (Example: Calcium uptake can be suppressed by the presence of excess potassium, sodium or magnesium.)

What does a nutrient deficient plant look like?

Plants suffering from nutrient deficiencies present a number of symptoms (Table 1).

Table 1. Symptoms associated with deficiencies of different nutrients.

Deficient Nutrient Function of Nutrient Symptoms of Deficiency Example
Nitrogen (N)
Present in most substances of cells

Plants grow poorly and are light green in color. Lower leaves turn yellow or light brown and stems are short and slender.

Nitrogen deficient plant
Phosphorus (P)

Present in DNA, RNA,  phospholipids (membranes), ADP, ATP, etc.

Plants grow poorly and leaves are dark green with purple tints. Lower leaves sometimes turn light bronze with purple or brown spots. Shoots are short and thin, upright, and spindly.
Phosphorus deficient plant showing dark green leaves and thin, spindly shoots.
Potassium (K)
Acts as a catalyst of many reactions
Plants have thin shoots, which in severe cases show dieback. Older leaves show chlorosis (loss of the normal green) with browning of tips, scorching of margins and many brown spots usually near the margins. Fleshy tissues show end necrosis (death of localized tissues).
Potassium deficient plant
Magnesium (Mg)
Present in chlorophyll and is part of many enzymes
First older, then younger leaves show interveinal chlorosis, become mottled and yellow, then reddish. Sometimes necrotic spots appear. Tips and margins of leaves may turn upward and leaves appear cupped. Leaves may drop off.
Magnesium deficient plant
Calcium (Ca)

Regulates the permeability of membranes; forms salts with pectins; affects activity of many enzymes

Young leaves become distorted, with tips hooked back and margins curled. Leaves may be irregular in shape and ragged with brown scorching or spotting. Terminal buds finally die. Plants have poor, bare root systems. Causes blossom end rot of many fruits. Increases fruit decay in storage. May be responsible for tip burns in mature detached lettuce heads at high temperatures.
Calcium deficient plant
Boron (B) Not really known; affects translocation of sugars and utilization of calcium in cell wall formation
Bases of young leaves of terminal buds become light green and finally break down. Stems and leaves become distorted. Plants are stunted. Fruit, fleshy roots or stems, etc., may crack on the surface and/or rot in the center. Causes many plant diseases: heart rot of sugar beets, brown heart of turnips, browning or hollow stem of cauliflower, cracked stem of celery, corky spot, dieback and rosette of apples, hard fruit of citrus, and top sickness of tobacco.
Boron deficient plant
Sulfur (S) Present in some amino acids and coenzymes

Young leaves are pale green or light yellow without any spots. Symptoms resemble  t hose of nitrogen deficiency.

Sulfur deficient plant
Iron (Fe) A catalyst of chlorophyll synthesis; part of many enzymes
Young leaves become severely yellowed, but main veins remain characteristically green (interveinal chlorosis). Sometimes brown spots develop. Part or entire leaf may dry up. Leaves may shed.
Iron deficient plant
Zinc (Zn) Part of enzymes involved in auxin synthesis and in oxidation of sugars
Leaves show interveinal yellowing. Later, they become necrotic and show purple pigmentation. Leaves are few and small, internodes are short and shoots form rosettes. Fruit production is low. Leaves are shed progressively from base to tip. Causes little leaf of apple, stone fruits and grape; sickle leaf of cacao; white tip of corn; etc.
Zinc deficient plant
Copper (Cu) Part of many oxidative enzymes
Tips of young leaves of cereals wither and their margins become yellow. Leaves may fail to unroll and tend to appear wilted. Heading is reduced and heads are dwarfed and distorted. Citrus, pome and stone fruits show dieback of twigs in the summer, burning of leaf margins, yellowing, etc. Vegetable crops fail to grow.
Copper deficient plant
Manganese (Mn) Part of many enzymes of respiration, photosynthesis, and nitrogen utilization
Leaves become yellow, but smallest veins remain green and produce a checkered effect. Necrotic spots may appear scattered on leaves. Severely affected leaves turn brown and wither.
Manganese deficient plant
Molybdenum (Mo) Essential component of nitrate reductase enzyme
Melons and probably other plants exhibit severe yellowing and stunting and fail to set fruit.
Molybdenum deficient plant

How can I tell the difference between a nutrient deficient plant and one with another disease?

Plants may suffer from a wide variety of problems that show similar symptoms. If a grower is unable to identify the cause of a plant’s problem, a remedy will be difficult to find. If the problem is biotic (caused by a living organism), some sign of the organism is usually visible, especially upon careful examination after incubation under humid conditions. Insects are often present on the plant or they may leave traces, such as webbing, eggs or cocoons. Fungi may be visible as fuzzy threads or a powdery coating. Bacteria may cause affected areas to appear slimy or water-soaked.

Abiotic problems (those stemming from non-living sources, such as environmental stress or nutrition) may cause the plant to appear generally unhealthy. The whole plant may look sickly or be stunted in growth. The foliage may begin to yellow or turn bronze or brown. A simplified diagnostic flow chart (Figure 1) can be used to make a visual diagnosis of a nutrient deficiency disorder.

Chart used as a key for visual diagnosis of plant nutrient deficiency, organized by leaf age, symptom, and the nutrient responsible (either due to deficiency or excess).

Figure 1. Key to visual diagnosis of nutrient deficiency.

The best way to check for a lack of nutrients in the soil is to test a sample of the soil in the laboratory. While there are do-it-yourself kits available, your county’s WVU Extension agent can provide the necessary supplies and technical assistance for proper sample collection and submission. The resulting soil analysis report will provide information on soil deficiencies and will make recommendations on how to correct them. Table 2 outlines the causes of common nutrient deficiencies of the soil and ways to correct them.

Table 2. Corrective measures for nutrient deficiency.

Deficiency Common Cause How to Correct
Nitrogen Excessive watering or waterlogged soil
Soil low in organic matter

Crop rem oval

Water plant less or ensure the area has adequate drainage.
Amend soil with a source of organic matter.
Grow legume crops, or fertilize using manure, blood meal, fish meal or inorganic fertilizer.
Phosphorus Cold, wet soil in early spring
pH too high or low

Crop removal

Compacted soil
Ensure area has adequate drainage.
Use soil amendment, such as lime, to adjust pH.
Fertilize using bone meal, rock phosphate, ammonium phosphate or manure.
Till or plow soil.
Excessive watering
pH too high
Crop removal

Water plant less.
Amend soil to adjust pH.
Fertilize using wood ash, greensand, potassium sulfate or potassium chloride.
Magnesium pH too acidic
Crop removal

Amend soil to adjust pH.
Fertilize using dolomitic lime, Epsom salts or foliar sprays of magnesium sulfate.
Calcium Excessive or not enough watering
Crop removal

Adjust watering schedule.
Fertilize using gypsum, calcitic lime, calcium sulfate, calcium nitrate, calcium carbonate or  dolomitic limestone.
Boron pH too high or low
Sandy soil with low organic matter

Lack of nitrogen
Crop removal

Amend soil to adjust pH.
Amend soil with a source of organic matter.
See nitrogen correction above.
Fertilize using borax, sodium or calcium borate.
Sulfur Sandy soil with low organic matter

Crop removal

Amend soil with a source of organic matter.
Fertilize using gypsum, ammonium sulfate, calcium sulfate or elemental sulfur.
Iron pH too high
Soil low in organic matter

Crop removal

Amend soil to adjust pH.
Amend soil with a source of organic matter.
Fertilize using foliar applications of iron chelates, ferrous sulfate or ferrous ammonium sulfate.
Zinc pH too high
Soil low in organic matter

Lack of nitrogen
Crop removal

Amend soil to adjust pH.
Amend soil with a source of organic matter.
See nitrogen correction above.
Fertilize using foliar applications of zinc sulfate.
Copper Compacted soil
Lack of nitrogen
Excess watering

Crop removal

Till or plow soil.
See nitrogen correction above.
Water less and ensure area has adequate drainage.
Fertilize using copper sulfate or other copper salts.
p H too high
Lack of nitrogen
Crop removal

Amend soil to adjust pH.
See nitrogen correction above.
Fertilize using manganese sulfate as either a foliar application or soil amendment.
pH too acidic
Crop removal

Amend soil to adjust pH.
Fertilize using sodium molybdate as foliar application or soil amendment.


Agrios, G.N. 2005. “Nutrient deficiencies in plants.” Plant Pathology . 372-373. K.D Sonnack (ed) Elsevier Academic Press, London, UK.

Photo credits: Nutrient deficiency in plant. and from online sources.

Bierman, M.P. and Rosen, C.J. 2005. “Diagnosing Nutrient Disorders in Fruit and Vegetable Crops.”

Author:  Mahfuz Rahman, WVU Extension Specialist – Plant Pathology

Last Reviewed: February 2022